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Intron Name: Anas_platyrhynchos_platyrhynchos_1_116775946_116776709_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

116775946 - 116776709

Intron Length:

764

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGTTGA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCCCTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAATCAC

U12 Branch Point Sequence:

CAAACTTTAGCT

Flanking Amino Acid:

DDDALGSSKKGKGGKASAVD

Intron Amino Acid Position:

101

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.6

0.84

38.1

Major BPS

61.7

0.29

63.7

32.3

Major PPT

86.4

0.82

0.6

82.4

22.2

Minor 5ss

38.2

-1.3

3.1

49.4

46.8

Minor BPS

54.1

0.21

1.6

66.83

43.6

Associated Gene:

Gene:

POLA1

Ensembl Gene ID:

ENSAPLG00000008944

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009433

116579111 - 116778480

199370