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Intron Name: Anas_platyrhynchos_platyrhynchos_1_116777369_116778357_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

116777369 - 116778357

Intron Length:

989

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAACGTC

5'SS Class:

strong_major

3'SS Sequence:

ACTTTAACTGAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATCAT

U12 Branch Point Sequence:

TGTACTTTAACT

Flanking Amino Acid:

AKAGEKLKYEVEEFTGVYDE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.8

0.73

36.9

Major BPS

80.4

0.76

80.3

31.8

Major PPT

63.3

0.3

1.1

62.5

37.2

Minor 5ss

40.3

-1.1

3.5

58.3

46.6

Minor BPS

80.1

1.02

1.1

89.7

34.1

Associated Gene:

Gene:

POLA1

Ensembl Gene ID:

ENSAPLG00000008944

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009433

116579111 - 116778480

199370