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Intron Name: Anas_platyrhynchos_platyrhynchos_1_116802258_116804425_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

116802258 - 116804425

Intron Length:

2168

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTGTG

5'SS Class:

strong_major

3'SS Sequence:

TCTTTCCTTACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAATCAC

U12 Branch Point Sequence:

CTTTCCTTACAG

Flanking Amino Acid:

TIAQARLGTPVDRPVRVYAD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.9

0.89

0.9

77.9

36.9

Major BPS

61.7

0.29

63.7

32.3

Major PPT

89.6

0.89

0.6

84.1

24.1

Minor 5ss

42.4

-0.8

3.1

57.3

47.4

Minor BPS

0.24

1.9

68.4

44.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010281

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041790

116792218 - 116813023

20806

ENSAPLT00000010728

116792218 - 116814307

22090