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Intron Name: Anas_platyrhynchos_platyrhynchos_1_116804543_116807694_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

116804543 - 116807694

Intron Length:

3152

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGATCA

5'SS Class:

strong_major

3'SS Sequence:

TTCTATATTTTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTGAT

U12 Branch Point Sequence:

ATTTTGTTGATA

Flanking Amino Acid:

LFPNSYLLVGVCSDDLTHKF

Intron Amino Acid Position:

112

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.4

0.98

0.8

80.4

27.6

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

79.9

0.67

0.8

78.2

34.6

Minor 5ss

38.2

-1.3

48.6

47.1

Minor BPS

55.9

0.18

71.48

34.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010281

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041790

116792218 - 116813023

20806

ENSAPLT00000010728

116792218 - 116814307

22090