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Intron Name: Anas_platyrhynchos_platyrhynchos_1_116808593_116811732_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

116808593 - 116811732

Intron Length:

3140

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGGCA

5'SS Class:

strong_major

3'SS Sequence:

CCACTTTGCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCCCAC

U12 Branch Point Sequence:

CTTTTCCCACTT

Flanking Amino Acid:

DDVYKHIKEAGMFVPTQRTE

Intron Amino Acid Position:

189

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.3

0.93

0.9

75.8

33.8

Major BPS

62.4

0.31

1.2

72.4

34.6

Major PPT

69.4

0.44

0.9

37.3

Minor 5ss

29.5

-2.3

3.4

38.8

46.5

Minor BPS

45.6

-0.2

2.1

43.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010281

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041790

116792218 - 116813023

20806

ENSAPLT00000010728

116792218 - 116814307

22090