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Intron Name: Anas_platyrhynchos_platyrhynchos_1_116860897_116881044_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

116860897 - 116881044

Intron Length:

20148

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTGAGTGGC

5'SS Class:

strong_major

3'SS Sequence:

TTCCCTGTAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGTGAC

U12 Branch Point Sequence:

TTCCCTGTAACA

Flanking Amino Acid:

PLSIKQFLDFGRDNACEKTS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.7

0.72

Major BPS

0.22

1.2

52.4

43.3

Major PPT

0.52

0.9

68.7

35.9

Minor 5ss

28.1

-2.5

3.1

35.3

41.4

Minor BPS

57.8

0.24

72.26

40.2

Associated Gene:

Gene:

PDK3

Ensembl Gene ID:

ENSAPLG00000010492

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010981

116829042 - 116881150

52109