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Intron Name: Anas_platyrhynchos_platyrhynchos_1_116945670_116952823_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

116945670 - 116952823

Intron Length:

7154

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTT|GTAAGTGTC

5'SS Class:

major

3'SS Sequence:

CTTGTTTTTGTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTAAT

U12 Branch Point Sequence:

ATTGTAATAACT

Flanking Amino Acid:

GNCEDYLMISLDDAGKIEHE

Intron Amino Acid Position:

210

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.1

0.64

74.4

34.2

Major BPS

84.4

0.85

1.1

34.5

Major PPT

84.6

0.78

0.7

80.6

31.4

Minor 5ss

39.8

-1.1

3.4

58.5

40.5

Minor BPS

51.1

0.11

76.25

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011089

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011546

116939587 - 116953931

14345