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Intron Name: Anas_platyrhynchos_platyrhynchos_1_116990997_116991431_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

116990997 - 116991431

Intron Length:

435

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGGATA

5'SS Class:

strong_major

3'SS Sequence:

TGTTATGTTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

TTTTGATTACTC

Flanking Amino Acid:

LQYAAPGGLIGVGTKIDPTL

Intron Amino Acid Position:

338

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.7

1.01

0.8

87.8

27.9

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

75.3

0.57

69.8

41.2

Minor 5ss

35.8

-1.6

3.3

48.1

47.6

Minor BPS

49.5

-0

2.2

71.1

40.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011402

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011967

116987994 - 116998971

10978