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Intron Name: Anas_platyrhynchos_platyrhynchos_1_11700515_11705333_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11700515 - 11705333

Intron Length:

4819

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTAAGTTCC

5'SS Class:

major

3'SS Sequence:

TTTTTTATTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TGTTTTTTATTC

Flanking Amino Acid:

FFSPWKTPKPMMERWENQGS

Intron Amino Acid Position:

531

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.6

0.58

1.1

69.2

36.4

Major BPS

96.5

1.15

0.6

34.2

Major PPT

92.5

0.96

0.7

85.7

33.4

Minor 5ss

44.4

-0.6

2.8

40.1

Minor BPS

61.4

0.34

1.5

70.06

35.9

Associated Gene:

Gene:

MAGI2

Ensembl Gene ID:

ENSAPLG00000012418

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012943

11484480 - 11769168

284689