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Intron Name: Anas_platyrhynchos_platyrhynchos_1_117079362_117079447_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

117079362 - 117079447

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGGTGTG

5'SS Class:

strong_major

3'SS Sequence:

TCTGCTTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GGCTTAG

U12 Branch Point Sequence:

CGAGGCTTAGGG

Flanking Amino Acid:

MEDQVVLTEKELLEDGFGEH

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.8

0.75

72.2

39.5

Major BPS

43.9

-0.3

1.6

37.1

44.2

Major PPT

86.4

0.82

0.8

84.1

30.8

Minor 5ss

29.5

-2.4

3.4

39.1

46.7

Minor BPS

37.9

-1

2.2

36.25

45.4

Associated Gene:

Gene:

SAT1

Ensembl Gene ID:

ENSAPLG00000012260

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043776

117078958 - 117079710

753

ENSAPLT00000012791

117077437 - 117079710

2274