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Intron Name: Anas_platyrhynchos_platyrhynchos_1_117104469_117104656_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

117104469 - 117104656

Intron Length:

188

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGAGTT

5'SS Class:

strong_major

3'SS Sequence:

CCTAACTGTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTAAC

U12 Branch Point Sequence:

CCTTTCCTAACT

Flanking Amino Acid:

VGSLLLLSGQVCYTEKNYIQ

Intron Amino Acid Position:

349

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.6

0.79

78.9

35.3

Major BPS

0.55

71.8

31.4

Major PPT

63.8

0.31

57.7

38.1

Minor 5ss

-1.7

3.8

55.2

Minor BPS

65.3

0.56

1.7

79.84

42.4

Associated Gene:

Gene:

ACOT9

Ensembl Gene ID:

ENSAPLG00000012395

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029404

117085591 - 117107056

21466

ENSAPLT00000012956

117085656 - 117104869

19214