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Intron Name: Anas_platyrhynchos_platyrhynchos_1_11741503_11744252_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11741503 - 11744252

Intron Length:

2750

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGTCAA

5'SS Class:

strong_major

3'SS Sequence:

TCCCATTATGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTAAT

U12 Branch Point Sequence:

AGCTCTTTAATC

Flanking Amino Acid:

SVTLRIIPQEELNSPASAPS

Intron Amino Acid Position:

834

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.5

0.84

74.1

38.3

Major BPS

87.2

0.92

0.9

87.6

25.6

Major PPT

74.2

0.54

0.9

68.8

35.8

Minor 5ss

33.1

-1.9

2.8

32.9

41.9

Minor BPS

70.3

0.62

1.2

69.08

36.8

Associated Gene:

Gene:

MAGI2

Ensembl Gene ID:

ENSAPLG00000012418

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012943

11484480 - 11769168

284689