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Intron Name: Anas_platyrhynchos_platyrhynchos_1_117445207_117445814_R

Intron Information:

Intron Rank:

140421

Intron Class:

major

Intron Phase:

Intron Coordinates:

117445207 - 117445814

Intron Length:

608

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGATGG

5'SS Class:

strong_major

3'SS Sequence:

TATTTTCTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTACAA

U12 Branch Point Sequence:

TTATTTACAAAC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.1

0.92

0.9

72.5

39.9

Major BPS

73.5

0.59

81.3

29.9

Major PPT

89.2

0.88

0.7

81.5

35.8

Minor 5ss

37.3

-1.4

47.6

47.9

Minor BPS

46.8

-0.2

1.8

61.51

37.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022934

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040021

117445113 - 117450350

5238

ENSAPLT00000020720

117444584 - 117446199

1616