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Intron Name: Anas_platyrhynchos_platyrhynchos_1_117718147_117721096_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

117718147 - 117721096

Intron Length:

2950

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGTCTT

5'SS Class:

strong_major

3'SS Sequence:

AACTGTTTTCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AACTTAC

U12 Branch Point Sequence:

GGTTTGCTAACT

Flanking Amino Acid:

AHFQEDKKEMMEELTEGIRW

Intron Amino Acid Position:

433

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

0.9

79.6

35.4

Major BPS

64.9

0.37

0.9

55.4

32.3

Major PPT

75.3

0.57

65.6

44.6

Minor 5ss

34.9

-1.7

3.1

47.1

42.6

Minor BPS

2.3

73.98

42.5

Associated Gene:

Gene:

PHEX

Ensembl Gene ID:

ENSAPLG00000012570

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028964

117664196 - 117763090

98895

ENSAPLT00000013128

117664196 - 117763090

98895