Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_117741406_117742396_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

117741406 - 117742396

Intron Length:

991

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTAAGTGGT

5'SS Class:

major

3'SS Sequence:

TTTGACATTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTCAC

U12 Branch Point Sequence:

CACACTTTGACA

Flanking Amino Acid:

KTLYASCMNENKIEKADVKP

Intron Amino Acid Position:

144

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.9

0.61

1.1

69.9

41.1

Major BPS

74.9

0.62

1.1

77.4

37.4

Major PPT

78.8

0.65

0.9

74.8

39.5

Minor 5ss

35.7

-1.6

3.3

45.7

43.5

Minor BPS

57.6

0.23

1.4

59.45

40.6

Associated Gene:

Gene:

PHEX

Ensembl Gene ID:

ENSAPLG00000012570

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013128

117664196 - 117763090

98895