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Intron Name: Anas_platyrhynchos_platyrhynchos_1_117742484_117756808_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

117742484 - 117756808

Intron Length:

14325

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAATATG

5'SS Class:

major

3'SS Sequence:

TTTCTTTTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTGAA

U12 Branch Point Sequence:

AGGTATTGAAAA

Flanking Amino Acid:

LRHNVDLKLKALLEKPISKR

Intron Amino Acid Position:

115

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.4

0.67

75.1

41.1

Major BPS

79.4

0.73

0.9

69.6

37.5

Major PPT

96.4

1.04

0.5

95.9

14.1

Minor 5ss

38.3

-1.3

2.9

42.6

44.4

Minor BPS

46.6

-0.2

1.7

54.03

37.7

Associated Gene:

Gene:

PHEX

Ensembl Gene ID:

ENSAPLG00000012570

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013128

117664196 - 117763090

98895