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Intron Name: Anas_platyrhynchos_platyrhynchos_1_117781524_117784491_R

Intron Information:

Intron Rank:

Intron Class:

minor

Intron Phase:

Intron Coordinates:

117781524 - 117784491

Intron Length:

2968

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATT|GTATCCTTA

5'SS Class:

strong_minor

3'SS Sequence:

TCGTTTTCTCCAG|G

3'SS Class:

strong_BPS

U2 Branch Point Sequence:

ACTACAT

U12 Branch Point Sequence:

TTTTCCTTGACT

Flanking Amino Acid:

EIVCVPSYMELWVFYTIWKK

Intron Amino Acid Position:

324

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

-0

1.2

53.3

40.3

Major BPS

61.4

0.28

1.1

36.5

Major PPT

84.4

0.77

0.8

37.3

Minor 5ss

90.6

1.37

1.1

86.9

30.2

Minor BPS

94.4

1.48

0.6

103.7

17.4

Associated Gene:

Gene:

SMS

Ensembl Gene ID:

ENSAPLG00000013124

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042177

117780234 - 117838870

58637

ENSAPLT00000037291

117780234 - 117802068

21835