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Intron Name: Anas_platyrhynchos_platyrhynchos_1_117792559_117793893_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

117792559 - 117793893

Intron Length:

1335

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGATAT

5'SS Class:

strong_major

3'SS Sequence:

TGCTATCTGTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATATGAA

U12 Branch Point Sequence:

TGTCTGTGGACT

Flanking Amino Acid:

LKQDGKYFTQILQKDSWRKL

Intron Amino Acid Position:

318

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.83

0.9

79.4

29.5

Major BPS

66.7

0.41

57.8

Major PPT

70.7

0.47

69.4

41.4

Minor 5ss

45.7

-0.5

2.9

64.3

47.2

Minor BPS

46.6

-0.1

2.2

69.85

40.9

Associated Gene:

Gene:

SMS

Ensembl Gene ID:

ENSAPLG00000013124

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013716

117792517 - 117825279

32763