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Intron Name: Anas_platyrhynchos_platyrhynchos_1_117794629_117795654_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

117794629 - 117795654

Intron Length:

1026

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATTTTT

5'SS Class:

strong_major

3'SS Sequence:

TTCATTCTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACTTCAT

U12 Branch Point Sequence:

ATTACAGTACTT

Flanking Amino Acid:

LDNLKGECYQVLIEDCIPVL

Intron Amino Acid Position:

253

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.9

0.92

0.9

89.8

23.7

Major BPS

78.6

0.71

79.6

32.9

Major PPT

82.6

0.73

0.7

81.3

30.6

Minor 5ss

46.2

-0.4

2.8

67.4

43.6

Minor BPS

43.7

-0.4

2.4

68.14

42.9

Associated Gene:

Gene:

SMS

Ensembl Gene ID:

ENSAPLG00000013124

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042177

117780234 - 117838870

58637

ENSAPLT00000037291

117780234 - 117802068

21835

ENSAPLT00000013716

117792517 - 117825279

32763