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Intron Name: Anas_platyrhynchos_platyrhynchos_1_117795745_117796671_R

Intron Information:

Intron Rank:

Intron Class:

minor

Intron Phase:

Intron Coordinates:

117795745 - 117796671

Intron Length:

927

Sequence Information:

Terminal Dinucleotides:

AT-AC

5'SS Sequence:

GAG|ATATCCTTT

5'SS Class:

strong_minor

3'SS Sequence:

ACTGTCTTCAAAC|A

3'SS Class:

minor_BPS

U2 Branch Point Sequence:

GTGTTAT

U12 Branch Point Sequence:

AATGCCTTAACT

Flanking Amino Acid:

LKPKMVTMVEIDQMVIDGCK

Intron Amino Acid Position:

223

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

38.4

-0.7

3.5

62.3

44.7

Major BPS

63.6

0.34

1.4

57.4

49.1

Major PPT

37.7

-0.7

3.2

55.4

38.8

Minor 5ss

100

1.66

0.5

100

Minor BPS

79.8

1.01

1.3

87.87

Associated Gene:

Gene:

SMS

Ensembl Gene ID:

ENSAPLG00000013124

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042177

117780234 - 117838870

58637

ENSAPLT00000037291

117780234 - 117802068

21835

ENSAPLT00000013716

117792517 - 117825279

32763