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Intron Name: Anas_platyrhynchos_platyrhynchos_1_117801048_117801794_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

117801048 - 117801794

Intron Length:

747

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTATGAACC

5'SS Class:

major

3'SS Sequence:

GCTGTTTTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATAAAT

U12 Branch Point Sequence:

ACTTCTATAAAT

Flanking Amino Acid:

QTKGKEETDRLLDKVEERMK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.9

0.56

65.2

39.1

Major BPS

74.5

0.61

79.6

29.1

Major PPT

83.1

0.75

0.9

80.2

37.3

Minor 5ss

40.4

-1.1

2.7

45.3

42.6

Minor BPS

59.8

0.39

1.7

76.57

39.8

Associated Gene:

Gene:

SMS

Ensembl Gene ID:

ENSAPLG00000013124

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042177

117780234 - 117838870

58637

ENSAPLT00000037291

117780234 - 117802068

21835

ENSAPLT00000013716

117792517 - 117825279

32763