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Intron Name: Anas_platyrhynchos_platyrhynchos_1_117857687_117863821_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

117857687 - 117863821

Intron Length:

6135

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTCGTATT

5'SS Class:

major

3'SS Sequence:

GTTTTCATTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TTTGTGTTACCT

Flanking Amino Acid:

VGHPMHLQYTVSLSSFVPRH

Intron Amino Acid Position:

396

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.9

0.66

1.2

83.1

35.7

Major BPS

100

1.24

0.5

100

Major PPT

0.79

0.8

82.2

34.1

Minor 5ss

-1.5

44.5

Minor BPS

49.8

0.07

2.4

78.66

44.1

Associated Gene:

Gene:

MBTPS2

Ensembl Gene ID:

ENSAPLG00000013395

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017197

117855203 - 117885806

30604

ENSAPLT00000013969

117855203 - 117886409

31207