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Intron Name: Anas_platyrhynchos_platyrhynchos_1_117882114_117885274_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

117882114 - 117885274

Intron Length:

3161

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATT|GTGAGTACC

5'SS Class:

major

3'SS Sequence:

CATTGTTTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTCCAT

U12 Branch Point Sequence:

GTTAAACTAACT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.5

0.53

69.6

34.4

Major BPS

77.3

0.68

1.2

86.7

32.3

Major PPT

82.6

0.73

0.9

76.6

37.2

Minor 5ss

34.1

-1.8

2.7

44.2

37.1

Minor BPS

47.7

-0

2.1

73.4

42.1

Associated Gene:

Gene:

MBTPS2

Ensembl Gene ID:

ENSAPLG00000013395

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017197

117855203 - 117885806

30604