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Intron Name: Anas_platyrhynchos_platyrhynchos_1_118001326_118002486_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

118001326 - 118002486

Intron Length:

1161

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTAAGTCAC

5'SS Class:

strong_major

3'SS Sequence:

GCTGACCTTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTGAA

U12 Branch Point Sequence:

CATTGCTGACCT

Flanking Amino Acid:

PYDTYPRPPSMSCASPYVEP

Intron Amino Acid Position:

644

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.4

0.83

0.9

72.7

38.8

Major BPS

73.3

0.58

0.9

63.4

35.6

Major PPT

70.6

0.46

39.6

Minor 5ss

-1.7

2.9

45.5

42.6

Minor BPS

48.1

-0

2.2

69.78

46.7

Associated Gene:

Gene:

CNKSR2

Ensembl Gene ID:

ENSAPLG00000013780

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030725

117959823 - 118180843

221021

ENSAPLT00000026218

117959823 - 118180843

221021

ENSAPLT00000047951

117959823 - 118180843

221021

ENSAPLT00000021556

117959823 - 118180843

221021

ENSAPLT00000042655

117959823 - 118180564

220742

ENSAPLT00000014394

117959823 - 118180564

220742

ENSAPLT00000036513

117959823 - 118180843

221021