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Intron Name: Anas_platyrhynchos_platyrhynchos_1_118050010_118087742_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

118050010 - 118087742

Intron Length:

37733

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGAAGT

5'SS Class:

strong_major

3'SS Sequence:

TCTTTTGTACCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATCAT

U12 Branch Point Sequence:

TCTTTTGTACCA

Flanking Amino Acid:

LTNIKPSEGLPLIPRSPTSS

Intron Amino Acid Position:

228

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.5

0.81

0.9

77.2

37.6

Major BPS

80.4

0.76

80.3

31.8

Major PPT

79.4

0.66

0.9

73.7

40.6

Minor 5ss

35.3

-1.7

3.1

46.5

42.9

Minor BPS

48.1

-0.1

2.2

65.59

41.9

Associated Gene:

Gene:

CNKSR2

Ensembl Gene ID:

ENSAPLG00000013780

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047951

117959823 - 118180843

221021

ENSAPLT00000042655

117959823 - 118180564

220742