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Intron Name: Anas_platyrhynchos_platyrhynchos_1_118081096_118087742_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

118081096 - 118087742

Intron Length:

6647

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGAAGT

5'SS Class:

strong_major

3'SS Sequence:

GTCTTTTTCTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTAAAA

U12 Branch Point Sequence:

AACACTTTAAAA

Flanking Amino Acid:

LTNIKPSEGLGMYIKSTYDG

Intron Amino Acid Position:

228

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.5

0.81

0.9

77.2

37.6

Major BPS

73.1

0.58

79.6

29.1

Major PPT

80.8

0.69

0.7

80.4

31.6

Minor 5ss

35.3

-1.7

3.1

46.5

42.9

Minor BPS

57.6

0.23

1.4

61.09

38.5

Associated Gene:

Gene:

CNKSR2

Ensembl Gene ID:

ENSAPLG00000013780

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030725

117959823 - 118180843

221021

ENSAPLT00000021556

117959823 - 118180843

221021

ENSAPLT00000014394

117959823 - 118180564

220742

ENSAPLT00000036513

117959823 - 118180843

221021