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Intron Name: Anas_platyrhynchos_platyrhynchos_1_118142820_118180500_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

118142820 - 118180500

Intron Length:

37681

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGCGGC

5'SS Class:

strong_major

3'SS Sequence:

TCTGTTATTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTGTTAT

U12 Branch Point Sequence:

CTTTCTGTTATT

Flanking Amino Acid:

SPSQVVDWMKGLDDCLQQYI

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.2

0.78

0.9

66.6

39.6

Major BPS

0.47

1.2

61.1

45.5

Major PPT

82.9

0.74

0.9

77.4

35.5

Minor 5ss

31.2

-2.1

3.3

41.1

45.6

Minor BPS

49.4

0.04

2.3

74.98

42.6

Associated Gene:

Gene:

CNKSR2

Ensembl Gene ID:

ENSAPLG00000013780

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030725

117959823 - 118180843

221021

ENSAPLT00000026218

117959823 - 118180843

221021

ENSAPLT00000047951

117959823 - 118180843

221021

ENSAPLT00000021556

117959823 - 118180843

221021

ENSAPLT00000042655

117959823 - 118180564

220742

ENSAPLT00000014394

117959823 - 118180564

220742

ENSAPLT00000036513

117959823 - 118180843

221021