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Intron Name: Anas_platyrhynchos_platyrhynchos_1_11817362_11821012_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11817362 - 11821012

Intron Length:

3651

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGATGT

5'SS Class:

strong_major

3'SS Sequence:

TTTACATTGCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAA

U12 Branch Point Sequence:

TGCTTTTTAACA

Flanking Amino Acid:

VLKLATKLLKELDSPFRLYG

Intron Amino Acid Position:

710

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.6

0.98

0.8

81.6

33.2

Major BPS

87.3

0.93

0.8

36.5

Major PPT

68.9

0.43

43.1

Minor 5ss

39.7

-1.2

3.1

56.6

47.5

Minor BPS

73.5

0.74

1.2

75.16

36.6

Associated Gene:

Gene:

PHTF2

Ensembl Gene ID:

ENSAPLG00000012275

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032328

11814494 - 11868631

54138

ENSAPLT00000020118

11814494 - 11868631

54138

ENSAPLT00000012860

11815824 - 11868631

52808