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Intron Name: Anas_platyrhynchos_platyrhynchos_1_118542034_118552123_R

Intron Information:

Intron Rank:

137133

Intron Class:

major

Intron Phase:

Intron Coordinates:

118542034 - 118552123

Intron Length:

10090

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTACGGTAT

5'SS Class:

major

3'SS Sequence:

CTTTTTTTGACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTAAAAT

U12 Branch Point Sequence:

CTTTTTTTGACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.2

0.57

1.1

68.5

38.7

Major BPS

70.6

0.51

1.1

75.9

34.4

Major PPT

85.3

0.79

0.9

83.2

31.9

Minor 5ss

37.5

-1.4

3.6

51.8

47.2

Minor BPS

72.4

0.7

1.1

77.15

33.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021276

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035709

118540843 - 118556663

15821