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Intron Name: Anas_platyrhynchos_platyrhynchos_1_118597376_118598407_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

118597376 - 118598407

Intron Length:

1032

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGTTGG

5'SS Class:

strong_major

3'SS Sequence:

TTGATCTTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

ATGTTTTTAATT

Flanking Amino Acid:

NHPFIVKLHYAFQTEGKLYL

Intron Amino Acid Position:

109

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.9

0.75

0.9

67.5

40.3

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

83.7

0.76

0.9

81.2

36.4

Minor 5ss

34.3

-1.8

2.8

37.3

42.5

Minor BPS

73.6

0.82

1.1

81.25

Associated Gene:

Gene:

RPS6KA3

Ensembl Gene ID:

ENSAPLG00000014093

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014786

118591778 - 118627694

35917