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Intron Name: Anas_platyrhynchos_platyrhynchos_1_11882137_11884428_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

11882137 - 11884428

Intron Length:

2292

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACGTCTC

5'SS Class:

strong_major

3'SS Sequence:

TTGGTGTTCTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAT

U12 Branch Point Sequence:

ATCTTCTGATGC

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

0.9

76.4

39.6

Major BPS

91.3

1.03

0.7

79.6

35.6

Major PPT

71.4

0.48

0.9

69.4

41.7

Minor 5ss

37.7

-1.4

3.2

52.9

44.2

Minor BPS

45.9

-0.3

1.9

56.76

42.1

Associated Gene:

Gene:

TMEM60

Ensembl Gene ID:

ENSAPLG00000001390

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025142

11881759 - 11891420

9662

ENSAPLT00000001379

11881759 - 11886036

4278