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Intron Name: Anas_platyrhynchos_platyrhynchos_1_11884796_11885144_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

11884796 - 11885144

Intron Length:

349

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAT|GTATTTATC

5'SS Class:

weak_major

3'SS Sequence:

TCTTCACATGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCACAT

U12 Branch Point Sequence:

TAAAACTTAACC

Flanking Amino Acid:

QQFTTMKLAYVDLKRNRSCS

Intron Amino Acid Position:

109

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.2

0.43

1.1

72.8

36.2

Major BPS

77.7

0.69

83.3

27.7

Major PPT

76.5

0.6

0.9

70.8

Minor 5ss

48.9

-0.1

2.4

67.5

36.4

Minor BPS

65.3

0.46

1.5

71.05

39.1

Associated Gene:

Gene:

TMEM60

Ensembl Gene ID:

ENSAPLG00000001390

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025142

11881759 - 11891420

9662

ENSAPLT00000001379

11881759 - 11886036

4278