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Intron Name: Anas_platyrhynchos_platyrhynchos_1_118874309_118893545_F

Intron Information:

Intron Rank:

146134

Intron Class:

major

Intron Phase:

Intron Coordinates:

118874309 - 118893545

Intron Length:

19237

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

CTTGTCTTTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTCAC

U12 Branch Point Sequence:

GGTTACTCACCA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.3

0.97

0.8

89.6

24.1

Major BPS

77.2

0.68

0.8

77.6

26.2

Major PPT

81.8

0.72

0.8

77.1

31.6

Minor 5ss

46.3

-0.4

2.8

64.1

41.5

Minor BPS

48.1

-0.1

62.68

42.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028720

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042924

118874193 - 118901411

27219