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Intron Name: Anas_platyrhynchos_platyrhynchos_1_119298133_119303668_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

119298133 - 119303668

Intron Length:

5536

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGCTCCCT

5'SS Class:

major

3'SS Sequence:

TTTTTTCTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTAAT

U12 Branch Point Sequence:

TCCCATTGAAAA

Flanking Amino Acid:

QSNSARLFVSDPANSAPSIL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

64.3

0.34

1.1

55.3

43.4

Major BPS

84.4

0.85

1.1

34.5

Major PPT

97.3

1.06

0.5

96.6

11.5

Minor 5ss

34.1

-1.8

3.3

46.7

Minor BPS

45.1

-0.3

1.7

51.84

39.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029454

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030803

119297898 - 119476244

178347