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Intron Name: Anas_platyrhynchos_platyrhynchos_1_119426533_119428615_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

119426533 - 119428615

Intron Length:

2083

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGTTAA

5'SS Class:

strong_major

3'SS Sequence:

TCATTACGTCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATATCAT

U12 Branch Point Sequence:

TTCACTTGAAAT

Flanking Amino Acid:

EIIEAKTLGKEPQFSKEQEL

Intron Amino Acid Position:

1334

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.92

0.8

26.2

Major BPS

79.4

0.73

80.1

Major PPT

71.1

0.48

62.6

43.2

Minor 5ss

45.6

-0.5

2.5

57.6

47.1

Minor BPS

57.9

0.33

1.6

74.94

41.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029454

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030803

119297898 - 119476244

178347