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Intron Name: Anas_platyrhynchos_platyrhynchos_1_119450030_119453424_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

119450030 - 119453424

Intron Length:

3395

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGGGTA

5'SS Class:

strong_major

3'SS Sequence:

TTATCCGTCACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGTTAT

U12 Branch Point Sequence:

TTATCCGTCACA

Flanking Amino Acid:

VDVSDARPGTNPTTRRSAKT

Intron Amino Acid Position:

1589

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.73

75.9

33.6

Major BPS

0.47

1.2

61.1

45.5

Major PPT

74.7

0.56

0.9

68.6

Minor 5ss

34.5

-1.8

3.7

46.6

43.4

Minor BPS

55.4

0.16

2.4

76.04

41.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029454

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030803

119297898 - 119476244

178347