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Intron Name: Anas_platyrhynchos_platyrhynchos_1_119598510_119602454_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

119598510 - 119602454

Intron Length:

3945

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

ATG|GCAATCTAG

5'SS Class:

major

3'SS Sequence:

TTCTTCGTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

GATTTTTTATTT

Flanking Amino Acid:

AEHIIPVKCDGLGFCNSIVN

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

64.8

0.35

1.3

51.3

42.2

Major BPS

96.5

1.15

0.6

34.2

Major PPT

82.1

0.72

0.8

31.1

Minor 5ss

33.1

-1.9

43.3

45.4

Minor BPS

59.5

0.38

1.5

73.06

38.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021659

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024259

119591926 - 119602521

10596