Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_119706937_119707072_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

119706937 - 119707072

Intron Length:

136

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACGCCG

5'SS Class:

major

3'SS Sequence:

GTCTCTCCCGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTCCC

U12 Branch Point Sequence:

GTCTCTGTGTCT

Flanking Amino Acid:

GGAPVPLIESELYFLIARFL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.54

1.2

57.9

46.7

Major BPS

28.8

-1.3

4.1

60.7

37.6

Major PPT

75.2

0.57

0.8

69.4

31.3

Minor 5ss

36.6

-1.5

3.3

48.4

47.3

Minor BPS

38.1

-0.8

3.7

44.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019022

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018182

119706876 - 119711874

4999