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Intron Name: Anas_platyrhynchos_platyrhynchos_1_11989532_11989612_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11989532 - 11989612

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACAGTTT

5'SS Class:

major

3'SS Sequence:

TGACCTACTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TAATTTTTATCT

Flanking Amino Acid:

TQRHSAVQTKEQYELVHRAI

Intron Amino Acid Position:

281

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.7

0.56

1.1

38.7

Major BPS

96.5

1.15

0.6

34.2

Major PPT

65.1

0.34

0.9

39.8

Minor 5ss

40.9

-1

3.7

64.2

47.3

Minor BPS

63.6

0.51

1.5

77.42

39.1

Associated Gene:

Gene:

PTPN12

Ensembl Gene ID:

ENSAPLG00000012236

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012752

11964408 - 12037590

73183