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Intron Name: Anas_platyrhynchos_platyrhynchos_1_11989691_11990351_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11989691 - 11990351

Intron Length:

661

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAAGGAAT

5'SS Class:

strong_major

3'SS Sequence:

TTCTATATTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATATCAT

U12 Branch Point Sequence:

ATATCATTGACT

Flanking Amino Acid:

DYTWNLLKAGKIPEEFNVFN

Intron Amino Acid Position:

255

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.78

78.6

37.2

Major BPS

79.4

0.73

80.1

Major PPT

0.77

0.8

81.6

34.4

Minor 5ss

33.5

-1.9

3.2

40.3

45.6

Minor BPS

69.6

0.7

1.6

83.93

36.1

Associated Gene:

Gene:

PTPN12

Ensembl Gene ID:

ENSAPLG00000012236

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012752

11964408 - 12037590

73183