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Intron Name: Anas_platyrhynchos_platyrhynchos_1_11995636_11998802_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11995636 - 11998802

Intron Length:

3167

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGT|GTAAGTATA

5'SS Class:

major

3'SS Sequence:

TTCTCTTATTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTTAT

U12 Branch Point Sequence:

TTTCTCTTATTT

Flanking Amino Acid:

VTFGPFRVSCEAEQARTDYF

Intron Amino Acid Position:

165

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.4

0.65

1.1

80.1

34.8

Major BPS

83.9

0.84

73.9

41.3

Major PPT

81.4

0.71

0.8

81.5

29.4

Minor 5ss

41.3

-1

2.8

52.2

44.4

Minor BPS

68.2

0.65

1.5

84.89

35.8

Associated Gene:

Gene:

PTPN12

Ensembl Gene ID:

ENSAPLG00000012236

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012752

11964408 - 12037590

73183