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Intron Name: Anas_platyrhynchos_platyrhynchos_1_120123240_120130058_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

120123240 - 120130058

Intron Length:

6819

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGAACA

5'SS Class:

strong_major

3'SS Sequence:

TTTTCCTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTATAC

U12 Branch Point Sequence:

TCTGCATGAAGG

Flanking Amino Acid:

EATQRITTRPDLPYEQARRS

Intron Amino Acid Position:

229

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.1

0.8

0.9

76.1

32.7

Major BPS

69.3

0.48

1.1

39.5

Major PPT

0.97

0.6

88.6

20.7

Minor 5ss

39.8

-1.1

2.8

Minor BPS

-0.5

2.1

53.08

47.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000031160

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036525

120027036 - 120135825

108790

ENSAPLT00000018830

120027036 - 120136610

109575