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Intron Name: Anas_platyrhynchos_platyrhynchos_1_120205553_120211575_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

120205553 - 120211575

Intron Length:

6023

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAACCCA

5'SS Class:

major

3'SS Sequence:

CTTTCGTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AACTCAA

U12 Branch Point Sequence:

ACAAACTCAACA

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.3

0.48

1.1

57.6

41.3

Major BPS

69.1

0.48

0.9

69.6

26.6

Major PPT

86.7

0.83

0.8

84.1

30.8

Minor 5ss

37.6

-1.4

3.1

45.4

44.5

Minor BPS

48.6

-0.1

1.8

57.28

41.3

Associated Gene:

Gene:

PRRG1

Ensembl Gene ID:

ENSAPLG00000008867

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009213

120205430 - 120223885

18456