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Intron Name: Anas_platyrhynchos_platyrhynchos_1_120337267_120337987_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

120337267 - 120337987

Intron Length:

721

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTAAGTGAC

5'SS Class:

strong_major

3'SS Sequence:

AATTATTTTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTCAA

U12 Branch Point Sequence:

ATGTGTTCAATT

Flanking Amino Acid:

YVNFFRQTIPNPVGGLYVAF

Intron Amino Acid Position:

162

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.6

0.86

0.9

76.2

33.5

Major BPS

75.6

0.64

1.1

77.7

37.1

Major PPT

80.3

0.68

0.9

73.2

40.9

Minor 5ss

33.5

-1.9

3.2

44.3

43.6

Minor BPS

50.1

0.08

1.9

70.01

41.8

Associated Gene:

Gene:

CYBB

Ensembl Gene ID:

ENSAPLG00000008961

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009356

120328749 - 120346869

18121