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Intron Name: Anas_platyrhynchos_platyrhynchos_1_120342472_120343892_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

120342472 - 120343892

Intron Length:

1421

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGTGTT

5'SS Class:

strong_major

3'SS Sequence:

CCTCTGGCTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCCT

U12 Branch Point Sequence:

TTTTTTTTCCCC

Flanking Amino Acid:

RSQQKVVITKVVIHPFKTIE

Intron Amino Acid Position:

300

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.3

0.95

0.8

27.8

Major BPS

39.5

-0.6

4.3

85.7

34.9

Major PPT

67.6

0.4

0.9

61.2

35.1

Minor 5ss

44.7

-0.6

3.2

66.4

45.1

Minor BPS

44.1

-0.4

3.6

72.92

38.9

Associated Gene:

Gene:

CYBB

Ensembl Gene ID:

ENSAPLG00000008961

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009356

120328749 - 120346869

18121