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Intron Name: Anas_platyrhynchos_platyrhynchos_1_120453724_120455954_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

120453724 - 120455954

Intron Length:

2231

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGAACA

5'SS Class:

strong_major

3'SS Sequence:

TTTCTGTTGGTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTTAT

U12 Branch Point Sequence:

TTATTCTGAGGG

Flanking Amino Acid:

TNPEFNETLKYVISHTQLET

Intron Amino Acid Position:

146

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.9

0.89

0.8

79.5

28.2

Major BPS

76.2

0.65

1.1

65.7

43.2

Major PPT

75.1

0.57

73.1

37.2

Minor 5ss

28.3

-2.5

2.7

32.3

41.9

Minor BPS

46.8

-0.3

56.75

44.5

Associated Gene:

Gene:

SYTL5

Ensembl Gene ID:

ENSAPLG00000009713

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010117

120450817 - 120464307

13491