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Intron Name: Anas_platyrhynchos_platyrhynchos_1_120463581_120464164_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

120463581 - 120464164

Intron Length:

584

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTAAGGTCC

5'SS Class:

strong_major

3'SS Sequence:

TTGCAATTGCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTAAT

U12 Branch Point Sequence:

TGTTTTGCAATT

Flanking Amino Acid:

LGGVRLSTGSGVSNGKEVDW

Intron Amino Acid Position:

320

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.71

67.8

38.3

Major BPS

79.3

0.73

1.1

77.9

34.9

Major PPT

0.36

1.1

58.5

46.1

Minor 5ss

38.5

-1.3

3.2

52.1

44.7

Minor BPS

48.2

-0

2.1

71.95

39.8

Associated Gene:

Gene:

SYTL5

Ensembl Gene ID:

ENSAPLG00000009713

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010117

120450817 - 120464307

13491