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Intron Name: Anas_platyrhynchos_platyrhynchos_1_120478034_120479345_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

120478034 - 120479345

Intron Length:

1312

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAGCAC

5'SS Class:

major

3'SS Sequence:

TTAACCCTTGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTAAC

U12 Branch Point Sequence:

CTTCTCTTAACC

Flanking Amino Acid:

FYRMQLGMLQPAQCGLDLRH

Intron Amino Acid Position:

355

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.9

0.68

66.4

39.3

Major BPS

77.1

0.67

77.9

32.2

Major PPT

77.1

0.61

0.9

70.2

Minor 5ss

30.4

-2.2

3.4

45.6

Minor BPS

76.5

0.81

1.2

79.35

35.8

Associated Gene:

Gene:

SRPX

Ensembl Gene ID:

ENSAPLG00000009886

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010298

120475331 - 120516972

41642