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Intron Name: Anas_platyrhynchos_platyrhynchos_1_120479480_120479943_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

120479480 - 120479943

Intron Length:

464

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAC|GTAAGTGAG

5'SS Class:

major

3'SS Sequence:

AATTTAATTCTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TGCTCTATAACT

Flanking Amino Acid:

GWSGVEPTCAPMNINVNVRT

Intron Amino Acid Position:

310

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.66

1.3

72.3

39.5

Major BPS

90.4

0.7

90.2

19.3

Major PPT

70.3

0.46

60.9

Minor 5ss

33.4

-1.9

3.2

39.4

39.8

Minor BPS

67.2

0.62

1.6

81.57

39.9

Associated Gene:

Gene:

SRPX

Ensembl Gene ID:

ENSAPLG00000009886

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010298

120475331 - 120516972

41642