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Intron Name: Anas_platyrhynchos_platyrhynchos_1_120482014_120487345_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

120482014 - 120487345

Intron Length:

5332

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTGAGTTTG

5'SS Class:

strong_major

3'SS Sequence:

TTTATTTCTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTCAT

U12 Branch Point Sequence:

TTTATTTCTACA

Flanking Amino Acid:

VWSGRPASCVDTEPPRIQCP

Intron Amino Acid Position:

167

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.8

0.77

0.9

74.8

38.1

Major BPS

79.7

0.74

79.6

35.6

Major PPT

89.4

0.89

0.7

84.4

30.5

Minor 5ss

37.9

-1.4

2.9

40.9

45.3

Minor BPS

49.2

-0

1.9

67.65

38.5

Associated Gene:

Gene:

SRPX

Ensembl Gene ID:

ENSAPLG00000009886

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010298

120475331 - 120516972

41642